Browse of TCMCG042C38172 protein

CDS

Accession Number	TCMCG042C38172
gbkey	CDS
Protein Id	XP_016470308.1
Location	join(54769..54792,59051..59124,59235..59374,59449..59535,60044..60131,60207..60290,60835..60912,61031..61110,62644..62722,62885..63109,65403..65462,65554..65812,67602..67853,68525..69913,70616..70886,70957..71089,75954..76041,76147..76225,77347..77642,79218..80322,80509..80880,81279..81889)
Gene	LOC107792594
GeneID	107792594
Organism	Nicotiana tabacum

Protein

Length	1957aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA319578
db_source	XM_016614822.1
Definition	PREDICTED: mediator of RNA polymerase II transcription subunit 13-like isoform X1 [Nicotiana tabacum]

EGGNOG-MAPPER Annotation

COG_category	K
Description	Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko03021        [VIEW IN KEGG]
KEGG_ko	ko:K15164        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko04919        [VIEW IN KEGG] map04919        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0005215        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0006810        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008643        [VIEW IN EMBL-EBI] GO:0015144        [VIEW IN EMBL-EBI] GO:0016020        [VIEW IN EMBL-EBI] GO:0016021        [VIEW IN EMBL-EBI] GO:0022857        [VIEW IN EMBL-EBI] GO:0031224        [VIEW IN EMBL-EBI] GO:0034219        [VIEW IN EMBL-EBI] GO:0040034        [VIEW IN EMBL-EBI] GO:0044425        [VIEW IN EMBL-EBI] GO:0050789        [VIEW IN EMBL-EBI] GO:0050793        [VIEW IN EMBL-EBI] GO:0051119        [VIEW IN EMBL-EBI] GO:0051179        [VIEW IN EMBL-EBI] GO:0051234        [VIEW IN EMBL-EBI] GO:0051239        [VIEW IN EMBL-EBI] GO:0055085        [VIEW IN EMBL-EBI] GO:0065007        [VIEW IN EMBL-EBI] GO:0071702        [VIEW IN EMBL-EBI] GO:0090213        [VIEW IN EMBL-EBI] GO:2000026        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGTGGACAAATGTGTTCAAGATCGGTGGCTTACATCAGATATCTTGGTTTCAGTTTCTTCCTCATGAATCTGATGTCAGCTCTCTGGTGGACAAAAGTGTGAAGCTGGATAAGAAAGACGCTGCTACATGGCTCGTGCTCTCATCGCATCTGCAATTGCAGAAGGAAGGATTTCTCAGCACGTGGACCAATTCCTTTGTTGGACCTTGGGACCCATCTCAGGGTCTTCACAACCCTGATGAGAAGATCAAGCTCTGGCTTTTTTCCCCTGGGCAGCATTCATCTGTTGTTGAAAAGGCACAGTCAGCTGTATCCAAATTAAGAGTTTTGGCATCTGGTCTCTGGGTGGCTCCTGGAGATTCAGAAGAGGTTGCTGCTGCGCTATCTCAGGCCTTAAGGAATTGCATGGAAAGAAAACTAAGAGGACTTTCATATGTGAGATATGGAGATGTATTTACAAAACACCATCCATTTTCACAGAATGAAGAGTTGTTCAGGAAGGGACAGCCAGTGGTTGAGTTCATATTTTCTGCTACGGAAGAGGCTATCTTTGTCCACGTTATAATATCTGCAAAGCTTATACGAGCACTTTCAAGTGGTGACATTGATAAAATATCAGAGGATACATCTAATGTCTCTGGTGAGAGGCTTCCAGTTATTGTCTCACCTCATGGAATGCGTGGGAGGCTCACTGGATGTTGCCCTGCTGATCTTGTGAAGCAAGTGTATCTTAGTTCCTGCAAGTTTAGTGCTTCAAACGGTATTGTTGGGCTACCATGCAATGTTTCTCGATCTGGTTATCAGCTCAAGGGACAGAATTGCTATGTTGAAGTTAGCCTTGGCTGCACTACGCCAGGAAACAACAATATAAAAGAAAGTTCAAGAATGCTTATTTACCCTCCTGAGGCTATTCTTGTTCCAGTGGTGCAAACAGCATGTGCTAGATCTTCTCTAAAAAGATTCTGGCTGCAGAACTGGATTGGGCCCTCATTGTCCTTTACATCCTCCTTTATGCATTGTTTTGATTTTAGTAGTGATGCCAAAGTCAATTCGACAGATGGATCTTGGCTTGATGCAAACATCATGCGCTCAAATCGGCAGTATAACAGTAGTAGTAATAGCAATAGTAGTAGTGTTAGCAGCGTAAGTACCTCTTCTAGTGATAGTGATTACAAGACCTCAGGAGCTGGCGATCTTGAAGCAGATGCCGATTCTTTGATGTGTAGACCGTCTGGATTATCTTCTGTGGATCAGTCTCGAAATGACAATCTTAAAACGGGCTTTAAGAGGTCACGAACTGGGATTTCAGAGTCATTTAGTCAGGCAGGAGCAGTGATAAATCCATCAACAAGTGACTATGCCTCAATGGAAGTTAATAATTCTGCAATAACTGGAGGAAATGATCAGATTGGGCTTCAGTGGGGTTGGGATGATGATGATAGAGGTGTAGGCATGGATATTCAGGCACTTCTATCTGAGTTTGGAGATTTTGGTGACTTCTTTGAGAATGACGTTTTGCCGTTTGGAGAGCCTCCAGGAACTGCAGAGTCTCAGGCTCTTATGTATCCTGCAGCAGATAGTGCAGATGTTGGTAGCAGCCCCTGTCCTTCGATGATGGATGTCAAAGATCAGATGCTTTTGCCAGTAGGTTTTCCATCATTTGATAGCTTTAATCAACCACCACCGCCAGCAAGTCTGGATGATTCACTGAGCAAACATCAAGAAGTTATAAAAAGCACTGCAGTTGCTTATCAAGTAAACAATTCTTCAGCAGCTATTGCTGGTGAATTCGATCACTTAATTAAAGCTGAAGCTCTGATGACTTTTGCTCCAGAGTATGGAGCAGTTGAAACCCCTACAGGTGAGAAGTCCCATTTGATTTTCAGGAATCCCTATCTCCCGAAGTCCCGGGAAGTGGATACTTCAAATTCAAGCTCAGATAGCTATGTCTACTCTGCAACCCCACCTTTATCGCCTTACTTTGACGCATGTGAGGAGAAGTCTGGTGTCACTGTAAACCTCAAAACAGGTTCTGGAAGGCGTGATACAAGCTCCATTATTCAATCAAAGAGATATTACACTCATATTGAAAGTGGAAAAGAGAAAAATGACGGCAAGTTGTCTGGTTCTGACCATAGTTGCGCTACACGTGAGGCTCAAGTAGAACAGTCTCCATTTTATGGTTTCAATTCAACAAATTCTGTTAAATCTATCCACAATAAAACCGAGAAAGCCAATGAAGCGTTACTAAAAGCAGACAGCTTTGGTCAATCAATGAAAACTGTGCTAGCAACAGAAGTTGAATGCCTTATGTGCCAGGCATTTATGTGTAAGATTCGGCATACGTTATTGTCTTCAAGCAGCTACCTTCCTGTTGGCGCGAGCAGGATGTCAGGGAGTACCATTATAAACCAGCCACAAGGTGAAGCAGTGGTTACAGTGGACAATATGTCAAGCAAATCCGAGATGAAAAAGAAAGAAATAATACCAGTTAGGATAGCAGGTGATATTGATGGAGGATTACTGGATGGGACCCTTAATGCACAAGTTGGTGTGTGGCGCTCTGTTGGAGTTTCTAAGGGCATGAAACAACCATCATCTGCTTTAGAAGCTTGCCACTCTGTTCAGCATAATTCTTTCATTGAGGAAAGTATGCTAGCTTATGGGCTACGGCAACCGCTTCAGGAACTCCTTGACGGGGTGGCTTTACTTGTGCAGCAAGCTACATCTCTTGTTGATGTTGCACTAGATGCTGATAATAATGATGGTCCTTATGGTTGGCTCACACTGCAGGAGCAGTGGAGGCGTGGCTTTTCATGTGGACCATCCATGGTTCATGCAGGTTGTGGGGGAGTATTGGCTTCCTGTCATTCGCTGGATATTGCTGGCGTGGAGCTTATTGATCCACTTTCAGCTGATGTTCAGGCATCATTTGCCCTCACTCTGCTGCAGAATGATATAAAAACAGCTATGAAATCTGCTTTTGGTACTATGGAAGGTCCTTTATCTGTTGTTGATTGGTGCAAAGGTCGCAGTCAATCAAATGATGGGGGAATATCTGGTGATGGTTTTTCTGCAGAGTCCACTGCAAGTGCAAGTGAATGTCGAGATTCTTCAAGTACCATATCGTTTTCTGTTGGAGAACCTATAAGTCCATCTCAGTCCTCCGCTGGTGGATCTAGTTTGAAAGATGGAATTAGGGTGGATGAGGCAAGTGAACGCAGATTAAGCCAAGACACTTGCCTATCAGAGTCAGAGCAGCTACCAGGCTCAAGGCTTAGGCCAACATTGTCTGCAGTACCGTATCCTGCTATACTTGTTGGATACCAAGATGATTGGCTTAAGACATCACCTAGTTCTCTTCAGCTCTGGGAAAAGGCACCTTTTGAGCCCTATGCAATGCCCAAGCATATGTCATATTACGTTGTCTGCCCAGACATCAATGCTCTAACAACAGCTGCAACTGATTTTTTCCAACAGCTTGGAACTGTTTATGAGACATGCAAACTGGGAACTCATTCACCTCAATGTATGGGAAATGAGATGGAGATAGACTCCGGGAAGAATGTATCTTCTGGTTTTGTTCTGATTGATTGCCCTCAGTCAATGAAGATAGACAGCAGTAGCACATCTATGCTGGGATCAATCAGTGATTATTTCCTATCCCTCTCCAATGGCTGGGATTTAGAAAGCTATTTGAAGTCTCTCTCAAAAGTTCTCAGGAATTTAAAGCTTAGTTCATGCATGACTATGAATCCAAAAGAAGGAAGTACTGGTCCGTGTACAGTGATATACGTGGTTTGCCCTTTCCCTGAGCCTCTTGCGGTCCTACAGACGGTGGTTGAATCTTCTATTGCTGTTGGATCAGTGGTTCTTTCTTCAGACAAAGAGAGGCGATCTACACTGCAGAATCAAGTCGGGAAGGCCTTAAGTTACTCAGCAGCAGTGGATGAGTCACTCTCAAATGTTTTAACTCTTTCAGGATTTTGTATTCCTAAGTTGGTATTGCAGATTGTAACTGTTGATGCAATTTTTAGGGTTACAAGTCCTGCTCTGAGTGAGCTTCTCGTCCTAAAGGAAATTGCTTTCACAGTTTATAACAAAGCCCGCAGAATATCTCGAGGGTCCTCCAGTGACATGGTTCAGTCATCATCCATGTCTGGTAGATCTCATCCGGTCTTGATGCAAATGACTTCCCCAGTTCCAGGTATGTGGAAGGACTGTGTTGGTCCTCGAAGCATAGGAACTTCCCTTCAAAGAGAGGCTGAACTTGATGCTAGCCTAAGGTCTGGTAGTTGGGACAACTGGCAAATATCAAGAGGGGGAAGTCTGGGATGTGATCCAAACAGAATTGGGGATTTTTCTTTTCAAGATGAAGTTCGTTATTTGTTTGAGCCCCTTTACATTCTTGCTGAACCAGGTTCATTGGATCGTGGACTTTCATTTCCTATGTCGGGTAATCTAATGGCTGAATCTTCAAAGCTTTTGTTAGATGATGGTACAAGTGGAAATTTTATGCAGAGTTCAGCTTCTTCAGGTGGCGGAGACACTGGACCAAACACACAGTCTGAAACATCTGAACCAGATGGCTTTGGTTCTGCACATCAAAAGTCACTTCCAAGCCTGCATTGTTGTTATGGATGGACTGAGGATTGGCGCTGGCTGGTTTGTATATGGACAGATTCCAGGGGAGAATTGCTTGATAATTATATATATCCATTTGGAGGAATTAGTAGTAGGCAGGATACGAAAGGTCTGCAATCCTTGTTTGTGCAAATTCTGCAGCAAGGATGCCAGATACTTCAGGCATGTCCTCCTGAGGCTGCCAATGCCAAGCCTAGGGATTTTGTTATTGCACGTATTGGAAGCTTCTTTGAGCTCGAATGCCAGGAATGGCAGAAAGCCTTGTATGCAATTGGGGGATCTGAGGTGAAGAAATGGTCTCTGCAGCTAAGACGCTCCGTGCCTGATGGAATGTCGGCAAGTAGTAATGGGACATCCTTGCAGCAACAGGAAATAGGTCTGATTCAGGAAAGAGCACTTCCTTCCTCCCCTAGTCCATTGTACAGTCCTCACTCAAAGGTTTCCTCTTTCATGAAAGGTGGCATGGGGCAACCATCCACAAGGAAGCAGTTAATTGGTGGACAGGGTATGGTGGACAACTCGAGGGGCTTACTTCAATGGGTGCAAAGCATTAGTTTTGTCTCTGTTTCAATTGATCATTCCTTACAGCTTATGTTCCAAGCGGATATAGTGAGTCATGGGACAAGTCAAAGTAGTGGCGTTCTGAGTCAGCCAGGTTATCTTGAAGGTTATACTCCAGTGAAGTCCCTTGGTTCTACATCCAACTCCTATATTCTAATCCCGTCACCGAATATGCGATTCCTACCTCCTGTTGGTCTTCAGCTTCACACTTGCCTAACTGCTGAATCACCACCACTCGCCCATCTTCTCCACAGCAAGGGCTGTGCTATCCCTCTTTCAACTGGTTTTGTGGTTTCAAAAGCAGTACCTACAATGAGGAGAGATGCAAGGAGCATCTCTAAAGAGGAATGGCCCTCAGTTCTTTCTGTCAGCCTCGTTGATTACTATGGTGGCAGCAACATCATCCAGGAAAAATTCTTTAAGGGTGTCGGCAAGGTTGGGGGAAGGGGTACCAGCTCAGAAACAAGAGACGTTGAAATAGAGACTCACTTGATTCTCGAGAACATAGCTGCAGAGCTCCATGCTTTATCATGGATGACTGTAAGTCCAGCATACTTGGAGAGAAGATCTGCTTTGCCTTTTCATTGTGACATGGTATTAAGGCTTCGAAGGCTCCTTCACTTTGCTGATAAGGAAGTTTCTCGGCAACCTGAGAAAACCCAAGTTTAG

Protein:   MWTNVFKIGGLHQISWFQFLPHESDVSSLVDKSVKLDKKDAATWLVLSSHLQLQKEGFLSTWTNSFVGPWDPSQGLHNPDEKIKLWLFSPGQHSSVVEKAQSAVSKLRVLASGLWVAPGDSEEVAAALSQALRNCMERKLRGLSYVRYGDVFTKHHPFSQNEELFRKGQPVVEFIFSATEEAIFVHVIISAKLIRALSSGDIDKISEDTSNVSGERLPVIVSPHGMRGRLTGCCPADLVKQVYLSSCKFSASNGIVGLPCNVSRSGYQLKGQNCYVEVSLGCTTPGNNNIKESSRMLIYPPEAILVPVVQTACARSSLKRFWLQNWIGPSLSFTSSFMHCFDFSSDAKVNSTDGSWLDANIMRSNRQYNSSSNSNSSSVSSVSTSSSDSDYKTSGAGDLEADADSLMCRPSGLSSVDQSRNDNLKTGFKRSRTGISESFSQAGAVINPSTSDYASMEVNNSAITGGNDQIGLQWGWDDDDRGVGMDIQALLSEFGDFGDFFENDVLPFGEPPGTAESQALMYPAADSADVGSSPCPSMMDVKDQMLLPVGFPSFDSFNQPPPPASLDDSLSKHQEVIKSTAVAYQVNNSSAAIAGEFDHLIKAEALMTFAPEYGAVETPTGEKSHLIFRNPYLPKSREVDTSNSSSDSYVYSATPPLSPYFDACEEKSGVTVNLKTGSGRRDTSSIIQSKRYYTHIESGKEKNDGKLSGSDHSCATREAQVEQSPFYGFNSTNSVKSIHNKTEKANEALLKADSFGQSMKTVLATEVECLMCQAFMCKIRHTLLSSSSYLPVGASRMSGSTIINQPQGEAVVTVDNMSSKSEMKKKEIIPVRIAGDIDGGLLDGTLNAQVGVWRSVGVSKGMKQPSSALEACHSVQHNSFIEESMLAYGLRQPLQELLDGVALLVQQATSLVDVALDADNNDGPYGWLTLQEQWRRGFSCGPSMVHAGCGGVLASCHSLDIAGVELIDPLSADVQASFALTLLQNDIKTAMKSAFGTMEGPLSVVDWCKGRSQSNDGGISGDGFSAESTASASECRDSSSTISFSVGEPISPSQSSAGGSSLKDGIRVDEASERRLSQDTCLSESEQLPGSRLRPTLSAVPYPAILVGYQDDWLKTSPSSLQLWEKAPFEPYAMPKHMSYYVVCPDINALTTAATDFFQQLGTVYETCKLGTHSPQCMGNEMEIDSGKNVSSGFVLIDCPQSMKIDSSSTSMLGSISDYFLSLSNGWDLESYLKSLSKVLRNLKLSSCMTMNPKEGSTGPCTVIYVVCPFPEPLAVLQTVVESSIAVGSVVLSSDKERRSTLQNQVGKALSYSAAVDESLSNVLTLSGFCIPKLVLQIVTVDAIFRVTSPALSELLVLKEIAFTVYNKARRISRGSSSDMVQSSSMSGRSHPVLMQMTSPVPGMWKDCVGPRSIGTSLQREAELDASLRSGSWDNWQISRGGSLGCDPNRIGDFSFQDEVRYLFEPLYILAEPGSLDRGLSFPMSGNLMAESSKLLLDDGTSGNFMQSSASSGGGDTGPNTQSETSEPDGFGSAHQKSLPSLHCCYGWTEDWRWLVCIWTDSRGELLDNYIYPFGGISSRQDTKGLQSLFVQILQQGCQILQACPPEAANAKPRDFVIARIGSFFELECQEWQKALYAIGGSEVKKWSLQLRRSVPDGMSASSNGTSLQQQEIGLIQERALPSSPSPLYSPHSKVSSFMKGGMGQPSTRKQLIGGQGMVDNSRGLLQWVQSISFVSVSIDHSLQLMFQADIVSHGTSQSSGVLSQPGYLEGYTPVKSLGSTSNSYILIPSPNMRFLPPVGLQLHTCLTAESPPLAHLLHSKGCAIPLSTGFVVSKAVPTMRRDARSISKEEWPSVLSVSLVDYYGGSNIIQEKFFKGVGKVGGRGTSSETRDVEIETHLILENIAAELHALSWMTVSPAYLERRSALPFHCDMVLRLRRLLHFADKEVSRQPEKTQV